Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKNTTPDMEAFKMAPCASAAQDENSSVSSQCCARVKKIGQNPACLCAVMLSNT-A---KS--SG-----IKPEIAMTIPKRCNIADRPVGYKCGAYTLP
2DS2 Chain:B ((7-63))
-------------------------------LRQCCNQLRQV--DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23996 for 228 contacts (-105.2/contact) +
2D Compatibility (PS) -4984 + (NN) -4192 + (LL) 1652
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -35320.0 ( -154.91 by residue)
QMean score : 0.255
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: