Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------------------------VTCSPTQLSSCVSAITSSSPPSKLCCSKIKEQKPCLCQYLRNPNLKRFINTPNARKVASTCGTPFPRC-----------------------------------------
1A9X Chain:A ((936-1073))
NSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDAT------HGTAIVLGEAGINPRLV-NKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIED-SRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
General information:
TITO was launched using:
RESULT:
Template:
1A9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15290 for 331 contacts (-46.2/contact) +
2D Compatibility (PS) -6289 + (NN) -893 + (LL) 348
1D Compatibility (HY) -800 + (ID) 550
Total energy: -23474.0 ( -70.92 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_1A9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A9X-query.scw
PDB file :
Tito_Scwrl_1A9X.pdb
: