Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDCTTVTGLLSTCSAFITYGSPDPYPGSPCCDAVMNLNLIADSTDNRKSVCGCLMGLITTY-NPNSTAIATLPGFCGVALGFTIDPNTDCNFVPLF
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGG-P--GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88002 for 617 contacts (-142.6/contact) +
2D Compatibility (PS) -9157 + (NN) -2656 + (LL) -76
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -107241.0 ( -173.81 by residue)
QMean score : 0.223
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: