Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTLTSGG-RDCLCLIVTGSVPFQIPINRTLAISL-PRACNMPGVP-VQCKV
1HYP Chain:A ((10-79))
------------DLSICLNILGGSLG--T--VDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGRSYPSNATCPR
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55538 for 406 contacts (-136.8/contact) +
2D Compatibility (PS) -6597 + (NN) -317 + (LL) -164
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -69466.0 ( -171.10 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: