Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SACSSTFFSALVQLIPCRAAVA----P-FSPIPPNEACCNAIKALGQPCLCVLVNG--------PPISG---------VDRNMALQLPEKCTANFEPCDVMK
1HSS Chain:A ((11-104))
-------AFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIV------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42373 for 384 contacts (-110.3/contact) +
2D Compatibility (PS) -6410 + (NN) -2814 + (LL) 468
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -53679.0 ( -139.79 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: