Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASTPSSNCESAQM--KLVPCLTYVTGS----D------SKP-----------PTECCSGLKDLNTNNPTCLCQLITQLNSTS-----SGS--SNVNVAKVLALPRDCSVTLITSDCPGKDLL
1PSY Chain:A ((14-120))
---SSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-----RCMR----
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13364 for 578 contacts (-23.1/contact) +
2D Compatibility (PS) -8162 + (NN) -6100 + (LL) 856
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -30820.0 ( -53.32 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: