Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICDISSGGIRSCQPAAAVRN---P-TD---------APSAECCAALAGADLACLCRYKSVGGMW---VRFYK-I----DVKRAMALPGKCGLTMPANC
1SM7 Chain:A ((14-104))
-------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28403 for 442 contacts (-64.3/contact) +
2D Compatibility (PS) -7019 + (NN) 1651 + (LL) 160
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -35561.0 ( -80.45 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: