Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
RECVPQL--NRLLACRAYLAAP---GAAAAAP-----------SAECCGALAGI--SRECACSTMA---------------------IINSIPSRCGVSQVN-CTASSTST
1W2Q Chain:A ((14-120))
SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLD----
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36307 for 368 contacts (-98.7/contact) +
2D Compatibility (PS) -6958 + (NN) -1160 + (LL) 48
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -49827.0 ( -135.40 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: