Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPADQMALKLAPCLTAAKDPEASPSKSCCAAVVDIWGHSTECLCAVLLSNTL------KRFG-----VKVEVAITIPKRCNIANRPIGYKCGDYTLPSLQD
2DS2 Chain:B ((7-64))
------------------------------LRQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI----------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31857 for 244 contacts (-130.6/contact) +
2D Compatibility (PS) -4900 + (NN) -3525 + (LL) 1732
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -41600.0 ( -170.49 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: