Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDTTLDCDSQVN--GLVGNCMTAVLIGT----K---------PSSKCCKFVRAAQPDCVCPKITGDVTKVL-------KLSTALKIAKRCNRELPHNYQCGSYTLP
1S6D Chain:A ((9-97))
-----SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30917 for 467 contacts (-66.2/contact) +
2D Compatibility (PS) -6397 + (NN) 682 + (LL) 124
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -42358.0 ( -90.70 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: