Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQSCSDWTQLLDCQNAASDPSATPSGECCNRIRQYQNAPDCLCTMLLAARNA--AQSTGLP---FNLQAALSIPAKCHVQVPSGYSCAGIPIPSS
3OB4 Chain:A ((428-489))
-------------------------QERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP--QRCD-------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31999 for 315 contacts (-101.6/contact) +
2D Compatibility (PS) -6086 + (NN) -4142 + (LL) 756
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -43671.0 ( -138.64 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: