Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNDFTALLPCQAATQDAQA------T-----------PTAACCSVVEKFKDDPACLCSTIAA---AKS---AGISI---NEANAESIPTRCKFQGYPSCAKKI
1W2Q Chain:A ((23-112))
-------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR---------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15183 for 388 contacts (-39.1/contact) +
2D Compatibility (PS) -6506 + (NN) -374 + (LL) 484
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -26529.0 ( -68.37 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: