Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNTFMSVLSCQSATMSES----T-M----PSPACCAALRKFHDADCLCQVLLSA-RS-----AA-----AIAN-----VPFNLKAALEI--PMKCALRTV-SAPPGYSCGGMVVPRSPPPTST
1BEA Chain:A ((16-120))
------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI-PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50084 for 509 contacts (-98.4/contact) +
2D Compatibility (PS) -7988 + (NN) -2566 + (LL) 260
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -63928.0 ( -125.60 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: