Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCDTSKFTNLQACLPAATGS-G-----S-------VTSSCCSAMMAYRSNPSCLCSTLVYAKSQL-SS----INLNNALAIPKACGYSSYIPSGFTCQGITVPR
1S6D Chain:A ((20-97))
---------MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL--DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM----------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30083 for 392 contacts (-76.7/contact) +
2D Compatibility (PS) -6248 + (NN) -878 + (LL) 940
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -40819.0 ( -104.13 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: