Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCQGSIQDLKICVPYVQKKGPKIPPSQACCDAIKGVDILCVCHHLPPDIGELI-------------SIEKVVFVLQVCREPLAPGTKCGT
2DS2 Chain:B ((7-65))
-------------------------LRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIG------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26830 for 259 contacts (-103.6/contact) +
2D Compatibility (PS) -4488 + (NN) 1278 + (LL) 984
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -31956.0 ( -123.38 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: