Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AMSAAECKEERRLGIKVCTPVVYGNDPTPACCERVRVTHVECVCPMITPKLAPLI-------------DVDRLVRLIKGCGRKVPRHFKCGGITTP
2DS2 Chain:B ((7-69))
---------------------------LRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGA--CPF----
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26790 for 303 contacts (-88.4/contact) +
2D Compatibility (PS) -5065 + (NN) 368 + (LL) 2048
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -32789.0 ( -108.21 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: