Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTICNMSGEGLMACKPAVSPP----NPA-------PPSAACCSALSHADMHCLCSYRNSKLLPSM-G----IDPNLALQLPKKCKFPNAAHC
1S6D Chain:A ((19-101))
--------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMS-QPC
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28951 for 437 contacts (-66.2/contact) +
2D Compatibility (PS) -7054 + (NN) -2601 + (LL) 504
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -42902.0 ( -98.17 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: