Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPMELSTCANAIISSSPPTATCCSKLKEQRSCLCQYVKNPNLQKFINSPNA---RKVASTCGSPFPNC
3ZR8 Chain:X ((1-65))
GPTEKAAVKKMAKAIMADPSKADDVYQKWADKG------YTLTQLSDFLKSKTRGKYDRVYNGYMTYRDYV
General information:
TITO was launched using:
RESULT:
Template:
3ZR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26136 for 364 contacts (-71.8/contact) +
2D Compatibility (PS) -6253 + (NN) -1061 + (LL) 472
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -37378.0 ( -102.69 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_3ZR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZR8-query.scw
PDB file :
Tito_Scwrl_3ZR8.pdb
: