Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGSICRMTQDGLTACKPSVS----G-QSPLPPSPACCAAISKADLPCLCSFKNSAL------LPYLG---------IDPNMATQLPAKCNIVTSTHC
1HSS Chain:A ((12-106))
------FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31858 for 413 contacts (-77.1/contact) +
2D Compatibility (PS) -6511 + (NN) 2118 + (LL) 292
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -39559.0 ( -95.78 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: