Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----VTCSPLELSSCFAAITSSAPPSSMCCSK----------LREQRPCLCGYIRDPNLS--------------QYVNSANARRVASTCGVPFPNC
2AJE Chain:A ((9-105))
QRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAHGYWTQQQMQQLQQNV
General information:
TITO was launched using:
RESULT:
Template:
2AJE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20822 for 371 contacts (-56.1/contact) +
2D Compatibility (PS) -7368 + (NN) -4866 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -35006.0 ( -94.36 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_2AJE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AJE-query.scw
PDB file :
Tito_Scwrl_2AJE.pdb
: