Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYTRLMIQVHSYVPFCAYTYDYFSYCLDFLTGYYYKPGKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTPPMLADKIQQLPLLCNTHLSFPISSSMDCSTV
1T12 Chain:A ((1-90))
------------AITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDR-QIACTCLKSAAGAIS-GINLGKAAGLPSTCGVNIPYKISPSTDCSKV
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88851 for 679 contacts (-130.9/contact) +
2D Compatibility (PS) -9321 + (NN) -3342 + (LL) 1052
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -102762.0 ( -151.34 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: