Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNVSERIYDSKNSLKFLDDEIYQSIERELQRQRSQLQLIASENFASKAVMEAQGSFLTNKYAEGYIGKRYYCGCEYVDEVENLAIERLCKLFNVRFANVQPHSGSQANQAVFASLLTPGDTILGLSISCGGHLTHGAAPNLSGKWFKSIQYAIDRGTCLLDMDEVERLALEHKPKLIIAGASAYPRRMDFKRFREIADKVSAYLLADIAHYAGLIAAGEYPSPAKYAHIITSTTHKTLRGPRGGVVITNDEALHKKVQSAVFPGLQGGPLMHVIAAKAVAFKEALAPEFKAYIKRVVENAKVLAQALQKHGLSVITGGTDSHIVLVDLRPQKLTGKGAVDSLERAGITCNKNSVPFDMEKPTITSGLRFGTAAETTRGLKAENFKEIADLINEVIQGLINGNNSD--VERIVKNKVKKICDDFPIY
3ECD Chain:B ((12-425))-------------SLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGY-----------ADEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSL------------------FNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAKKINSAVFP----GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEALRTNPEGDHATEQRVRREIFALCERFPIY


General information:
TITO was launched using:
RESULT:

Template: 3ECD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -222202 for 3377 contacts (-65.8/contact) +
2D Compatibility (PS) -41777 + (NN) -27359 + (LL) 1284
1D Compatibility (HY) -36400 + (ID) 11300
Total energy: -337754.0 ( -100.02 by residue)
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_3ECD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ECD-query.scw
PDB file : Tito_Scwrl_3ECD.pdb: