Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDSPGIFSAETKLEKALVKSAWSAIKGD-DVILLLIDASSYLKNIERIKTIFTRLRHTKTKCIFVINKIDLVKK-----PELKMTYKHLDLLYKLKKIFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTD-----RPEEYIDDV |
1EGA Chain:B ((8-296)) | -----CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDE---MVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFL----DIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179814 for 2102 contacts (-85.5/contact) +
2D Compatibility (PS) -30534 + (NN) -12060 + (LL) 1660
1D Compatibility (HY) -20000 + (ID) 5050
Total energy: -245798.0 ( -116.94 by residue)
QMean score : 0.473
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