Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFTYTRTALASLLTLCSFSGFAADSFNEGMKGVKKQENIKSITTSEKMEVMKTSNKRLKEKMDRICNADPRKKAEELKKKEELKLAAEKKKEELAEKKRKETKLASEKKAKPLDAKNSNVESSKTRGTETQKARDVKKNFKKDVKIVGQNAEKKGEASPVILVGGVDVIDTNQGTSGLKITFGGVVDAQGYGKAGPSGEDYKHYNVMSGKSTGYYEDISDKVKGANPIFPSGIGNIGDYSEDIDMIADAILHLRAEDKNEDKGLLYGADVQFQVPVTEGKGASQGVRATRGRSAHVFLS-SRYGDLKLGYQFGPEALMRLDATRIATIDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKLSFRMAGKYHKNVMTTLPFRFAYYSPNY----MGARFGVSYSPRYDSNLFVIK-D--GDNIKHVGPDYEHIVSAGASYEYDFSERKVKVKVAAVGEYGQAKEPDSTKYAYKEYVEYNDLMGVNLGISADCNINEDQGVKFAASFAYLGKSGQPKGIEKLVGNVYQKIDGKGVTDDDKRVKELEDQFKGDDKNTMYWTAGAGYQHEN-FYISLTYFGSKMSD-------GDKLHDVAFGIQYDLSPASSKGKFVPYASLHYFKTDEKQGGGYKITKKDSSGIAPSNQGVLFLTGMKFSF |
| 2J1N Chain:A ((32-346)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQTYMRLGFKG-ETQVTDQLTGYGQWEYQIQGNSA--E--NENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVT-SWTDVLPE----------FGGD-T----------Y--GSDNF------------------MQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPSGEGFTSGVTNNGRDALRQNGDGVGGSITYDY--EG----FGIGGAISSSKRTDAQNT---AAYIGNGDRAETYTGGLKYDAN-----NIYLAAQYTQTYNATRVGS-------------------------------LGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKN-----MSTYVDYKINLLDDNQFTR----------DAGINTDNIVALGLVYQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15451 for 2318 contacts (6.7/contact) +
2D Compatibility (PS) -31076 + (NN) -7894 + (LL) 18352
1D Compatibility (HY) 400 + (ID) 2400
Total energy: -7167.0 ( -3.09 by residue)
QMean score : 0.137
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