Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQNGIQVYKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGKGR
1UGI Chain:A ((2-84))
--------------TNLSDIIEKETGKQLVIQESILMLPEEVEEVIGNKPE--------SDILVHTAYDES-TDENVMLLTSDAPEYKPWALVIQ---DSNGENKIKML
General information:
TITO was launched using:
RESULT:
Template:
1UGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 20707 for 556 contacts (37.2/contact) +
2D Compatibility (PS) -8624 + (NN) -1742 + (LL) 2484
1D Compatibility (HY) -3600 + (ID) 700
Total energy: 8525.0 ( 15.33 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_1UGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UGI-query.scw
PDB file :
Tito_Scwrl_1UGI.pdb
: