Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRLKKIHWLLVTNVIALFCIGIVVQYSSAGGKWAPFAIHQLVIFSFFFLLAIAMSFIELDFYLKHAYFFYIAAVISLLVVNFFGLYTMGATRWIRIGPISLQPSEFAKVGLILALARYFNKQSVYKMMEFQRLLKALIFIFLPVFLVLKQPNLGTAVIMLFIGASIIFTAIIKRAHLIIYGIISILVIPAIWPSLRSYHKQRILSFLDSSVDPLGIGYNAQQSQIAIGSGGLFGKSFVSGSQTQLGFLPEKHTDFAFAVLSEEWGFLGSMTLIVLYTTLLAIIFSIAYRSKNYFSKLVSIGIFAFFGVHFFINIGMTIGLLPVIGDPLPFLSYGGSTTAASSICIGLLLSSV--ASMKDLKLKLSISSIERPVV-----
4WD8 Chain:A ((25-292))----SKIIFRLLLNVLMSIIAIISYQWYEQLGIHLTVAPFSLLGIAIAIFLGFRNSASYSRFVEARNLWGTVLIAERTLVRQLRNIL----------------PAE---------------------HDAHRRIVSYLVAFSWSLKHQLRKTDP---------------TADLRRL----------------------LPEERVTEILASS---------MPTNRILLLAGNEIGQLREAG----------KLSDITYGLMDNKLDELAHVLGGCERLATTPVPFAYTLILQRTVYLFCTLLPFALVGDL---------------HYMTPFVSVFISYTFLSWDSLAEELEDPFGTAANDLPLNAMCNTIERNLLDMTGQ


General information:
TITO was launched using:
RESULT:

Template: 4WD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -234886 for 1906 contacts (-123.2/contact) +
2D Compatibility (PS) -27002 + (NN) -8185 + (LL) 9400
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -272423.0 ( -142.93 by residue)
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_4WD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WD8-query.scw
PDB file : Tito_Scwrl_4WD8.pdb: