Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTDYNINLTDSALKKIHSLVEQEEDKSSILRVAVSGGGCSGFKYNFLMDQIDKNLSLSDDDDDDEFDDEDDDDDESEDYRSRSSFSRKSKDIVINDKDGNPVLMVDNCSVKFLNNSIIDYTENLSGSGFQVKNALAKSQCGCGNSFSV
1R94 Chain:A ((1-97))
----MSITLSDSAAARVNTFLANR-GKGFGLRLGVRTSGCSGMAYVLEFVDEPTPE-----------------------------------DIVF--EDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKD----------
General information:
TITO was launched using:
RESULT:
Template:
1R94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44520 for 628 contacts (-70.9/contact) +
2D Compatibility (PS) -10662 + (NN) -4205 + (LL) 268
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -67319.0 ( -107.20 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_1R94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R94-query.scw
PDB file :
Tito_Scwrl_1R94.pdb
: