Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MISIFVEKGIVELKDENGTPISHKIIKHNIY-PHIENKINVSLMEEDSNGKNLLVKGCCDISTIESLIKME |
| 4LYL Chain:B ((3-84)) | NLSDIIEKETGKQLVIQESILMLPEEVEEVIGNKPESDILVHTAYDESTDENVMLLTSDAPEYKPWALVIQD---SNGENKIKML |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2800 for 416 contacts (6.7/contact) +
2D Compatibility (PS) -7140 + (NN) 51 + (LL) 184
1D Compatibility (HY) 0 + (ID) 650
Total energy: -4755.0 ( -11.43 by residue)
QMean score : 0.201
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