Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFVIATFYHFVKLSNYYDMKDEIKAACDNFELKGTILLAEEGINATISGERNAINKIFNFLCSDYRLKDLTWKESAAKYQPFSKMKVRLKREIVNLGVSNLDTSLRGKYIDPDHWDDFISQPDVLVIDTRNEYEVKLGKFKNAINPYIQYFREFPQWA-----------------------K---S---FSKNKNLKVAMYC-TGGIRCEKSTAYMKSLGFNDVYHLKGGILSYLERTHNKNGNWEGECFVFDDRIAINSSLAPSNKIKCIFCSNQVSADELKSVSRGQVVCSDCNPS |
3G5J Chain:A ((5-133)) | ---------------------------------------------------------------------------------------------------------------SVIKIEKALKLDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFVLEY--------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -33985 for 704 contacts (-48.3/contact) +
2D Compatibility (PS) -11076 + (NN) -5999 + (LL) 10868
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -46642.0 ( -66.25 by residue)
QMean score : 0.359
|
|
|