Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKKYDETKVKPAISTSQEPKRINGSKFQSVLSKRRYDINFDDKKYAVKTVKTRFLETEQQSSKLRDLLESIPVIGRFLAKIFTSEKETYKKLQLQIDRSSKIRNESRIDDKYTEEISSKLKKSNIEQVDDKKSRSP
2E12 Chain:A ((1-93))
MPKYA------PHVYTEQAQIATLEHWVKLLDGQERVRIELDDGSMIAGTVAVR------------------PTIQTYR----DEQEREGSNGQLRIDHLDASQEPQWIWMDRIVAVHPM----------------P
General information:
TITO was launched using:
RESULT:
Template:
2E12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23254 for 599 contacts (38.8/contact) +
2D Compatibility (PS) -9524 + (NN) 3671 + (LL) 3428
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 17829.0 ( 29.76 by residue)
QMean score : 0.107
(partial model without unconserved sides chains):
PDB file :
Tito_2E12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E12-query.scw
PDB file :
Tito_Scwrl_2E12.pdb
: