Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNNDPTVNLPISIRKLSSNKFIEEICQDQFEDQDNALFEDSFINKIKEGDVVEGIITRVNPNDIVVHIGLKSDGRIPIKELGCNDKIVVGSKIRVYVERIEDYHGNVVLSREKAIRDEKWNKLEEDAVTKAEVSGVIKRSIKCGFIVDLGDGISAFLPLSHVDLKQVKDARHLIETEQKFIVLKMDKKQGNIVVSRKLVLEKLHAGEKTKFLEFLNEGDIIEGKIKSITHYGVFVGIHESDAVGVIDGLLHITDISWSRVSHPSAAFACGQIIKVKIIKIDKENAKVSLGIKQLEDNPWQDVESKYQVDSIHKGHITSIE-DYGLFVELKPG-IEGLVHSSEITWVKSNLPVNSLVTRGQEVSVKILNVDITKNRMSLSMKRCV--DNPWQVFVNKYPPGSIVSGKVKNNTISYMSITFNDDEIDENVEGTIYAQDLSWSKNGSDEIKKYNVGDTIEAKVIRANVNRTRIYLGIKQIEYDPLIELIKKVKVGDKMQVTVGKREDSGLVVEVENDVALLIDQEHLPESKKFSISDKIEVEVLGVEEYNVILSAK |
| 3GO5 Chain:A ((3-222)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NTNLASFIVGLIIDENDRFYFVQKD------GQTYALAKEEG----------QHTVGDTVKGFAYT-DM-KQKLRLTTLE----V------TATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILP-E-L---KELWPKKGDQLYIRL-EVDK-KDRIWGLLAYQEDFQRLARPA-YNNMQNQNWPAIVYRLKLSGTFVYLP----ENNMLGFIHPSERYA---------EPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQMILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96636 for 1600 contacts (-60.4/contact) +
2D Compatibility (PS) -22609 + (NN) -1161 + (LL) 18328
1D Compatibility (HY) -2000 + (ID) 1900
Total energy: -105978.0 ( -66.24 by residue)
QMean score : 0.313
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