Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------MKQYTFRIDNKDPLYKKLIKLPTAYYRLKHDGNKHNIHSNNNV--ILEIGNNTNGVKLRWENDKIVLHK-GSSALY
3FN2 Chain:A ((6-102))
YTMQRDNQKTLAVYMFEEINRDVEYLSGRLSEKELKDKYRYYGRGYVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFLIDEKMFEEEIL
General information:
TITO was launched using:
RESULT:
Template:
3FN2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2590 for 375 contacts (6.9/contact) +
2D Compatibility (PS) -7269 + (NN) 1600 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -5629.0 ( -15.01 by residue)
QMean score : 0.182
(partial model without unconserved sides chains):
PDB file :
Tito_3FN2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FN2-query.scw
PDB file :
Tito_Scwrl_3FN2.pdb
: