Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------------------------------MTDKKDNAKANSGKIMYPNFFEIDFIINEKEIDCNVTRMLIEKAKKGHKFGETWEDYYRSI--SDNKRISIY-KNV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3EB8 Chain:A ((53-399)) | AEKHSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYLDGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAINCCTSIIPNDDYFHV---------KDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINELGINEFIDSKKELQMLSYNQVNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTSAFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVSFAIISPD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3793 for 240 contacts (15.8/contact) +
2D Compatibility (PS) -6802 + (NN) 502 + (LL) 1116
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -5291.0 ( -22.05 by residue)
QMean score : 0.164
|
|
|