Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKISKLILSALKANKYTKVIVLFSSIFVILFSVIYCNYSLRDNFLSSYRDSSVSLKSVLENSIIKKYHYLLIEKHHIKYKSFDYINQLVKLRAELLQSVGEVKDLGLILYDQNSRIIFSHFNTQDHDYEQLLTNDEIDKLLNNQEIFYTIGHTLISIFPIFHENDTKPSFFLKIIQNHDNFYVMVYSLFLTFLGLLLIILILVMLYLHFSNTQMLVKQHKTNIELQQMKEALEQENTNKLKFFASVTHELRTPLNAIIGFAELIKNETLGSMDNYQYKEYVDDIYNAGTHLLALINDVLDFSKAESSSLTVEKVKFNLNKIIDSCLNMLSPKLKETGISL--EKEIPNRQLLVIADPKRMKQVIINLLSNSIKFTPKDG---LIRMVIKENIEKNLLTIEFHDNGIGIMQQDIYKVMSVFGQADSG--YRNEGTGIGLPLSKKLVELMGGTFNIKSEAKLGTTITLNFFYEEQTCEDLIDF |
| 3DGE Chain:B ((14-239)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYN-SLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPC-PVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVE--DNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73151 for 1502 contacts (-48.7/contact) +
2D Compatibility (PS) -22561 + (NN) -169 + (LL) 21908
1D Compatibility (HY) -18400 + (ID) 3900
Total energy: -96273.0 ( -64.10 by residue)
QMean score : 0.346
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