Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDYEEIFLNKIKDIKEEGRYREFTHFASLPGRLPYIMDCERNR------EVIVWCSNNYLGMSQNESVVAAIQNS----SVGAGGTRNISGTTKEVVELEQSLACLHNKEAALTFACGYLANQTTLSTLSSVIPDVVIFSDEKNHSSMIEGIKSGKRPKHIFKHNNVDHLEQLLKSVDRKTPKIIAFESIYSMDGDIAPLREICNLADQYNAITYLDEVHAIGMYGLRGGGIAEREGLMDRVTVIQGTLSKAFGVMGGYIASSKSLVDVIRSSAPGFIFTTAMSPVLAAAAKASVEHLKSSNVE--REKQRQVVEKVKNSLSSVGINFIPTETHIIPIIIGDPELSKRASKLLFDEYGVYVQHINYPTVPRGTERFRITPTPYHTDEMIEHLTESLIKVFVKLSVSVACLC |
| 2BWP Chain:D ((1-398)) | -MDYNLALDKAIQKLHDEGRYRTFIDIEREKGAFP---KAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204492 for 3369 contacts (-60.7/contact) +
2D Compatibility (PS) -42018 + (NN) -17827 + (LL) 1712
1D Compatibility (HY) -36400 + (ID) 9550
Total energy: -308575.0 ( -91.59 by residue)
QMean score : 0.552
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