Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKDTVITEEIIEHAKYYVKHKSHISEYPGGLESEKQVLTKILGFLEGKFNNMQLDSDLVDKPATLNQAVDEADDEQLQSPEPKSADGC-------------
1V74 Chain:B ((1-87))
MNK-----MAMIDLAKLFLASKITAIEFSERICVERRRL----------YGVKDLSPNILNCGEELFMAAERFEPDADRANYEIDDNGLKVEVRSILEKFKL
General information:
TITO was launched using:
RESULT:
Template:
1V74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1691 for 453 contacts (3.7/contact) +
2D Compatibility (PS) -7477 + (NN) -469 + (LL) 1052
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -9853.0 ( -21.75 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1V74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V74-query.scw
PDB file :
Tito_Scwrl_1V74.pdb
: