Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFCVKAPAKINLFLHVVEKKETGYHLIEGLFVFANLSNFLEIKVGEKDFRYDNPIVEFVNSELKIS-NKYNTVMRAVNLLLRHAPVRTKVTVKVVKNIPTSAGLGSGSSDAGAVIRTLGKLWKIDRPILNEIALSVGADVPASIDSKPVLVRGIGEELCYINKFSLPTNIVLAKPKKKFLSTPEVFSKYGGNFSK-P---IEWR-DDTEKDLLKLLKETENDLQEIAISLVPEIRDVILALESQEGSILSRMSGSGVTCFGIFDSEENAKTAAVNIREKQPEWWVCDAQLIV |
| 1UEK Chain:A ((1-263)) | ---MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSGLH------F------QGPYGRENLAYRAASLYLEAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPA-EVDLFALARTLGADVPFFLLGRGAEARGVGERLKPLA-LP-PVPAVVFFP-GLRVPTPLVYRAVRPEDFGPDLPVEAILEALARGEEPPYWNSL----EGPAFRLFPELKEVRGRMRA-LGLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAWGRAWAGTLGGG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138270 for 2179 contacts (-63.5/contact) +
2D Compatibility (PS) -27553 + (NN) -4733 + (LL) 1384
1D Compatibility (HY) -7200 + (ID) 3700
Total energy: -180072.0 ( -82.64 by residue)
QMean score : 0.451
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