Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQFENFYITTPIYYVNDKPHIGHAYTSLICDVTARFMKLAGKNVKFTTGTDEHGQKIEKAAKTKGMHPKEFTDKVSVSFRKLAEFIDFQYDDFIRTTEERHEKAVVALWDRLEERGQIYLDSYSGWYSVSDEAFYQESELIDG-KAPTGAEVEWVKEESYFFRLSSWQNKLLELYKNQPNFIFPESRKNEVISFVKSGLTDLSISRISFNWGIKVPRNDKHIIYVWVDALTNYLTSIGFPNTENEEYKKFWAESQSVIQVADTWIQKEIQISASRARMTSNLADNSFNIHVIGKDILRFHAVYWPAILLAADLPLPKQIVVHGWWLNEGKKISKSLGNVIDPIALAKEFGVDQLRYFLLREASFGQDGNFSKKNMISRINSELANNIGNLVQRTISFLHKRCFGVVPT------VDKSLL-KGEEGLPNYRAIFNQVMDHLSKYEFNHIILLIINISSEANAYIDKSAPWILSKTDRERMNLVIYKLLEYIRIIGILLQPIVPRPAEVILDQLQIPKEQRDLKSLCGAYVSSGTTLHKPTPVFLRIE |
4PY2 Chain:B ((25-528)) | ----EKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSARKEGITPRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSVRDEAYYGEEE----RYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENNPGFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGDEKHVMYVWVDALTNYITALGYPDTTDERW-AYWPA----------------------------------NAHIIGKDISRFHAVYWPAFLMSAQLPLPKRVFAHGFLF-------------IDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLA-------LGAIFAVVAEANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADKRQFADVLASPLAGGTDLPAPQPVFPRYV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -327455 for 4057 contacts (-80.7/contact) +
2D Compatibility (PS) -50293 + (NN) -21222 + (LL) 4548
1D Compatibility (HY) -44400 + (ID) 11950
Total energy: -450772.0 ( -111.11 by residue)
QMean score : 0.569
|
|
|