Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVDSHCHLIYFS-DDEIPEVISRAEQNGVKILHNICVNADDVPKLLKIASSYNQVYSSIGIHPLDASVENGKCMHADELVELIKN--QKVVSIGETGLDFYKSN-NKSNQKKSFASHIEAARITGLPLVIHTRGVDSEVIDMLKSEMKNGPF-NGVMHCFTSSKELAHQSIDLGLYISFSGIITFKNASLLRRIAQDVPRERVLVETDAPYLSPEPHRGKKNEPAMVKYVVDCLAELWSASPDKVAEVTTNNFFRLFTKLKLKEIL |
| 1ZZM Chain:A ((4-259)) | RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPGMLEKHSDVS--LEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRH-D--LPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNVP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147805 for 2185 contacts (-67.6/contact) +
2D Compatibility (PS) -26929 + (NN) -11054 + (LL) 996
1D Compatibility (HY) -10000 + (ID) 3450
Total energy: -198242.0 ( -90.73 by residue)
QMean score : 0.574
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