Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKMYEECGVFGIS----CNKDSAFDSILGLHALQHRGQESFGVVTSN-NDKLHSYHFQGQVSSVLDNIDEIKKSLPGNYAIGHVRYSTSGNKSG--VQPILGKSNKFGDFAIAHNGNLINISPIREQLIKQGRV-FQSDIDTEVVARLVEANTKN---------SFLGSFIYALKQIQGAYSFVA-INREVVVGVRDSAGIRPLVLGKLN-----SSYVLASETCALDIVNAEFIREIEPGELVTIDQNGNLASAFPLSQQKSSFCIFEYIYFSRPDSIIEDRSIYDIRKEIGRTLAEESPPKN---NVDMVVPIPDSGIPAAIGYTKYSGLPIELGIIRNHYIGRTFIQPTAEVRKVRIKLKFNANKDILKGKNIILIDDSIVRGSTLKSIIVMLKDAGVKEIHLKISSPPIKYSCFYGIDTPECKDLIAASKSVREIEAIIGVNSLTFLSIDGLYQAVNGEKRNNTAPQYCDACFTGDYPIGK |
1ECF Chain:B ((1-465)) | --------CGIVGIAGVMPVNQ-SIYDA---LTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEA--RHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNS-PYG-ITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE--NPDIQQFECSVFNGVYVTKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291724 for 3990 contacts (-73.1/contact) +
2D Compatibility (PS) -46546 + (NN) -10797 + (LL) 1148
1D Compatibility (HY) -36000 + (ID) 8450
Total energy: -392369.0 ( -98.34 by residue)
QMean score : 0.485
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