Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIVIVGLQWGDEGKGKIVDYLSENADTVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVLRTGKISIIGNGVALDPYALISEIESLRVKGMDINPNNLMVSESCPLILSVHKEKEKLFEDLNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNKRLDTLLNYHN-AIRKGLSYRVIKKEEMLREIEEIAEKIIPYRKPVWKILNDFVKEGKKIIFEGAQGTFLDIDHGTYPFVTSSNTIASQVMTGSGLSSNA--YVIGVAKAYTTRVGNGPFPTE--------QRNEVGNSLFTIGKELGTVSNRKRRCGWFDAVLVRQAVQLSGVSSIILTKLDVLDSFDKIKICTGYQYSGKIYDYLPASRSIQEELEPIYEEFPGWKENTQGEKLAEKLPVNLIKYVKRVEELIGIPIHLISAGPKREDVIKLKDFKFSESVLVSY |
| 3UE9 Chain:D ((17-447)) | --NVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTL------TILRLIPSGIMREGVACYIGNGVVLSPEALFKEIGELEEAGLSVR-ERLFISEATTLILPYHIAIDQAREAR----------RGIGPAYEDKVGRRALRVQDLFDARTFADRLRENLDFHNFVLTQYLGGAAVDFQATLDTMLGYADRLRPMVADVSRRLYEENHAGRNLLFEGAQGTLLDIDHGTYPFVTSSNCVAGAAAAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKIDGEDADLLPRGAAEVARCEPVYETFGGWKESTVGINSWDALPANARAYLTRVQEVAGVPIDMVSTGPDRDETILLRHPFKV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209605 for 3551 contacts (-59.0/contact) +
2D Compatibility (PS) -43815 + (NN) -15815 + (LL) 648
1D Compatibility (HY) -31600 + (ID) 9350
Total energy: -309537.0 ( -87.17 by residue)
QMean score : 0.582
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