Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGIP-NKLD----PHEPENLAKAIK----KLNLKYVVITSVDRDDLPDGGASQFIKCIEEIRKITP---ETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMV-PRLYARIRPRARYFHSLYLLKMVKQINPKLL-TKSGLMVGL-GETKEEVLQVMDDLRSAEVDFITIGQYLQ-PTPKH--AK------IDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
| 1OLT Chain:A ((51-295)) | -----------------------------------------------RPLSLYVHIP-FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLN---KAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARE--IGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVAQREGVLHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85047 for 1624 contacts (-52.4/contact) +
2D Compatibility (PS) -23805 + (NN) -6796 + (LL) 2296
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -118952.0 ( -73.25 by residue)
QMean score : 0.319
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