Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYYRDK--LLMIDANLNVDQVKQEIESKISCSLV
4JLB Chain:B ((1-198))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALI-EEVFPKHGNVIFDGFPRTVKQAEALDEML-EKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKY--------NPPPPGVKVIQREDDKP-EVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIG----
General information:
TITO was launched using:
RESULT:
Template:
4JLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93151 for 1500 contacts (-62.1/contact) +
2D Compatibility (PS) -20992 + (NN) -6104 + (LL) 964
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -134833.0 ( -89.89 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_4JLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JLB-query.scw
PDB file :
Tito_Scwrl_4JLB.pdb
: