Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGN--SIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3MBQ Chain:B ((34-160))
------------IIRLEHAKGLDLPAYETAGSAGMDLRAAVAEDRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTPGTIDSDYRGEVKVLLINLGDDDFRIERGMRIAQAVFAPVIQPKIE--ERA-----------------
General information:
TITO was launched using:
RESULT:
Template:
3MBQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75928 for 862 contacts (-88.1/contact) +
2D Compatibility (PS) -13517 + (NN) -4901 + (LL) 1352
1D Compatibility (HY) -11200 + (ID) 3750
Total energy: -107944.0 ( -125.23 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_3MBQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MBQ-query.scw
PDB file :
Tito_Scwrl_3MBQ.pdb
: