Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRRITLNSNFMFGASDIKSLPNESAP----EIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKEIDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINNESVSIRQISVRVKYEMTKVRDEFFKFTR
3PQC Chain:B ((15-160))---------------------PGDYPPPLKGEVAFVGRSNVGKSSLLNALFN-RKIAFVSKTPGKTRSINFY-LVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLL


General information:
TITO was launched using:
RESULT:

Template: 3PQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71658 for 930 contacts (-77.1/contact) +
2D Compatibility (PS) -15256 + (NN) -6223 + (LL) 1544
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -108143.0 ( -116.28 by residue)
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_3PQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PQC-query.scw
PDB file : Tito_Scwrl_3PQC.pdb: