Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEVGAGTLHPATIMSAIDVKPTKIAYLQPVVRPADGRYGDN---PNRLYQHHQYQVIIKPSG---------NNLQDVYLSSLRALGISTEKYDIKFIEDDWENPSVGASG---LGWEVTCN----GMEVTQLTY---IQ--QIG-------SINCRIIPG-EVAYGLERLAMCIQGVNNVYDIIWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 3ERR Chain:A ((352-500)) | --------------------------------------------ALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPY---RLVEVAT----GDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYMGKEVLEPG---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ERR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35995 for 699 contacts (-51.5/contact) +
2D Compatibility (PS) -13038 + (NN) -2478 + (LL) 9708
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -45603.0 ( -65.24 by residue)
QMean score : 0.298
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