Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFKSVVLCILDGWGNGIGDSKYNAISNANPPCWQYISSNYPRCSLSACGTDVGLPDGQIGNSEVGHMNICSGRVVMQSLQRIDREIKT--IENNKNLRSFISDLKDKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHE-IKVVIHAFLDGRDTLPNSGKKCVQEFEENIKG-NDIRIATVSGRYYAMDRDNRWERTIETYEAIAFARATCHNNVMSLIDNNYQNNITDEFIRPTVIGDYK----G-IELKDGVLLANFRADRMIQLASILLGKT--GYT-E--VAKFSSILSMMKYKEDLQIPCLFPPAFFTNTLGEIIADNKLRQLRIAETEKYAHVTFFFNCGKEEPFSNEERILIPSPKVETYDLQPEMSAFELTEKLVGKIRSQEFTLIVANYANPDMVGHTGNMEAAKKAVLAVDDCLAKVLNTVKEINDAVLIVTADHGNVECMFDEKNNTPHTAHTLNKVPFIIYPNSCNNLKLKDGRLSDIAPTILQLLGIKKPDEMTGSSLIV |
| 1O98 Chain:A ((2-509)) | -SKKPVALIILDGFALRDET-YGNAVAQANKPNFDRYWNEYPHTTLKACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRINIAIREGEFDRNETFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPLECIEDSYKHGIYDEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNEDFREFDRGPKHPKHLFFVCLTHFSETVAGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILA-KGGIAIITADHGNADEVLTPD-GKPQTAHTTNPVPVIVTKKGIK--LRDGGILGDLAPTMLDLLGLPQPKEMTGKSLIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -282845 for 4661 contacts (-60.7/contact) +
2D Compatibility (PS) -52361 + (NN) -9824 + (LL) 400
1D Compatibility (HY) -40400 + (ID) 10700
Total energy: -395730.0 ( -84.90 by residue)
QMean score : 0.518
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