Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKKLTENKKPLVDKEDKKTPPVKGFTKKNKSRRDFITLTTCAMASIGTVSGLWPLIKSMNPSAEVLAMSTVEVNLSGIQEGHGIKVKWQGKPVFIRRRTKQEIKAARVVNVEDLRDPQSDEQRVHKGKD-EWLIMVGVCTHLGCVPVEHATKDGNGWFCPCHGSYYDTSGRVIGGPAPKNMVVPDYFFPNENVVVIGKKA
3CX5 Chain:P ((21-184))----------------------------KGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRV---KDPQWLIMLGICTHLGCVPIGEA-GDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG----


General information:
TITO was launched using:
RESULT:

Template: 3CX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45960 for 1073 contacts (-42.8/contact) +
2D Compatibility (PS) -17302 + (NN) -1935 + (LL) 1260
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -83837.0 ( -78.13 by residue)
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_3CX5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CX5-query.scw
PDB file : Tito_Scwrl_3CX5.pdb: