Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFLLKPKKSLGQNFILSSEITKRIVVLAGNLEDFNVIEIGPGYGALTKEILAHNPKSLLAIEKDSNLVKCHDQLLNEHQGKFRIVEADALYVVEEELIERPVKVIANLPYNISLALFLKWLNKIKLFTTFTLMFQKEVADRIIARPNSKDYGSLSVLSQLLCDIRREFDIEPKEFFPRPKVYSSVITVKPLPTQRFAVNLEALTKLTRAVFAQRRKMLRNSLQNVT---NRTETALENAKLSGNERPKNLTVEQFCLLANNM
3FUX Chain:C ((23-267))
---------KRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGL--PVRLVFQDALLYPWEEVPQGSL-LVANLPYHIATPLVTRLL-KTGRFARLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLTPT----GALDDPGLFRLVEAAFGKRRKTLLNALAAAGYPKARVEEALRALGLPPRVRAEELDLEAFRRLREGL
General information:
TITO was launched using:
RESULT:
Template:
3FUX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162936 for 1948 contacts (-83.6/contact) +
2D Compatibility (PS) -26004 + (NN) -10705 + (LL) 864
1D Compatibility (HY) -16800 + (ID) 4500
Total energy: -220081.0 ( -112.98 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3FUX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FUX-query.scw
PDB file :
Tito_Scwrl_3FUX.pdb
: