Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
2K1H Chain:A ((2-86))
EIIAISETPNHNTMKVSLSEPRQD-NSFTTYTAA-QEGQPEFINRLFEIEGVKSIFYVLDFISIDKEDNANWNELLPQIENTFAKSN-------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42806 for 513 contacts (-83.4/contact) +
2D Compatibility (PS) -9044 + (NN) -2523 + (LL) 5364
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -53459.0 ( -104.21 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_2K1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1H-query.scw
PDB file :
Tito_Scwrl_2K1H.pdb
: